Ocean isosurfaces

A tool for extracting isosurfaces from oceanographic simulation output, such as from ROMS or HOPS. It also has the ability to compute depth-adjusted means and standard deviations, so that statistical isosurfaces (such as temperature relative to the depth-adjusted mean) may be generated.

Browse the documentation and examples:

PREREQUISITES.txt: Packages needed by the isosurfacer.
USAGE.txt: Examples on how to use the isosurfacer.
netcdf_utils.py: Wrapper class for reading NetCDF files.
vtk_utils.py: Tools to convert Numeric arrays into VTK data structures.
MBARI_utils.py: Tools common to manipulating ROMS or HOPS data
roms_extractor.py: Isosurface extractor main program.
vertical_profiler.py: Tool to gather basic statistics (depth adjusted mean and standard deviation) from ROMS or HOPS data.
MBARI06.roms.settings: Dataset specific settings for the MBARI '06 ROMS run.

You can download a tarball of the above files here.

Matthew Hall

Last modified: Thu May 8 14:35:40 CDT 2008